Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----------MKGLTELLKGSLEGMILERISRGETYGYEITKYLNDL-GFDEIVEGTVYTILVRLEKKGLVEIEKKKSE-LGPPRKFYTLSPAGEEELAIFWKRWDFIQGKIMQVKGGQA
2ZFW Chain:A ((23-134))
MDFEDIYRFFQDPPPHYLSKELAVCYVLAVLRHEDSYGTELIQHLETHWPNYRLSDTVLYTALKFLEDEQIISGYWKKVEGRGRPRRMYQLAQANDDRSRDLAQLWERYLSS---------
General information:
TITO was launched using:
RESULT:
Template:
2ZFW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30928 for 660 contacts (-46.9/contact) +
2D Compatibility (PS) -10388 + (NN) -1572 + (LL) 708
1D Compatibility (HY) -1600 + (ID) 1100
Total energy: -44880.0 ( -68.00 by residue)
QMean score : 0.434
(partial model without unconserved sides chains):
PDB file :
Tito_2ZFW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZFW-query.scw
PDB file :
Tito_Scwrl_2ZFW.pdb
: