Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFKKIILSIATIAATASLAVSVQASEKVELKVATDSDTAPFTYQKDGKFKGYDVDVVKAVFKGSKYKVTFKTVP-FDTISTGID-AGKFDLSANDFSYNKERAEKYLFSDPISRSNYAVVGKKGSHY-KSLSDLSGKSTEVLSGVNYAQVLENWNKNHPNKKPIKIKYVSGTTGVTSRLKNIESGKIDFILYDAISSDYIVKDQSLNLSVSPLKGKIGNNKDGLEYLLLPKDKKGKTLQKFINKRIKVLKENGTLARLSKQYFGGDYVSNIDK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
4P0G Chain:A ((7-435)) | ------------APTALERVQKEG----VLRVITRNSPATYFQDRNG-ETGFEYELAKRFAERLGVELKIETADNLDDLYAQLSREGGPALAAAGLTPGREDDASVRYSHTYLDVTPQIIYRNGQQRPTRPEDLVGKRIMVLKGSSHAEQLAELKKQYPELKY----EESDAVEVVDLLRMVDVGDIDLTLVD---SNELAMNQVYFPNVRVAFDF--GEARGLAWALPGGD--DDSLMNEVNAFLDQAKKEGLLQRLKDRYYG-----HVDVLGYVGAYTFAQHLQQRLPRYESHFKQSGKQLDTDWRLLAAIGYQESLWQPGATSKTGVRGLMMLTNRTAQAMGVSNRLDPKQSIQGGSKYFVQIRSELPESIKEPDRSWFALAAYNIGGAHLEDARKMAEKEGLNPNKWLDVKKMLPRLAQKQWYAKTRYGYARGGETVHFVQNVRRYYDILTWVTQPQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P0G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48490 for 1928 contacts (-25.2/contact) +
2D Compatibility (PS) -25523 + (NN) -8938 + (LL) 3048
1D Compatibility (HY) -7600 + (ID) 2800
Total energy: -90303.0 ( -46.84 by residue)
QMean score : 0.372
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