Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNKKNNYDLMYFIPLVFLIYPIGGILYYHYPFWTLFFTLAFVGAYLYSVIIRGESKYHMIAWSTMLTYIFYMTIFINSGFIWYIYFLSNLLVYRFRDKLKSFRFISFACTLATVVFLCFFKASDFGDRIMFLIVPIFCIGYMWIAIENRNSEEQREKIAEQNQYINILSAENERNRIGRDLHDSLGHTFAMMTLKTELALKLLEKRNYDKVQKELSELNHISHQSMSEVRQIVSNLKYRTVVEEIDELYRLFQLSNIKLTVVNKLETSQLSPVTQSTITMILKELSNNIVKHAE--ADSVELSLVR----------QGATINIEMIDNGCGFTNLDGDEFHSIQERLTIVEGTLTILSRSKPTHIQVVLKEV |
1R62 Chain:A ((230-347)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ELAHDPDQIEQVLLNIVRNALQALGPEGGEIILRTRTAFQLTLHGERYRLAARIDVEDNGPGI----GLGLSIARNLIDQHSGKIEFTSWPGHTEFSVYLPI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R62.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37351 for 579 contacts (-64.5/contact) +
2D Compatibility (PS) -9144 + (NN) -410 + (LL) 24616
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -25039.0 ( -43.25 by residue)
QMean score : 0.493
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