Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTISNQELTLTPLRGKSGKAYIGTYPNGERVFVKYNTTP-------------ILPALAKEQIAPQLLWARRTSNGDMMSAQEWLDGRTLTKEDM-----G--SKQIIHILLRLHKSRPLVNQLLQ-LGYKIENPYDLLMDWEKQTPI----QIRENTYLQSIVTELKRSLPEFRTEVATIVHGDIKHSNWVITTSGLIYLVDWDSVRLTDRMYDVAYILSHYI----PQKHWKDWLSYYGYKDNEKVWSKIIWYGQFSYLSQIIKCFDKRDMEHVNQEIYELRKFRELIKKHNAS |
| 3TM0 Chain:A ((22-261)) | -----------TEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFER-HDGWSNLLMSEADGVLCSEEYEDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKP---EEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRADKWYDIAFCVRSIREDIGEEQYVELFFDLLGIKPD---WEKIKYYILLDELF---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TM0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68063 for 1476 contacts (-46.1/contact) +
2D Compatibility (PS) -21861 + (NN) -6952 + (LL) 4884
1D Compatibility (HY) -7600 + (ID) 1800
Total energy: -101392.0 ( -68.69 by residue)
QMean score : 0.232
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