Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKLIAIDMDGTLLNDE-KKIPKENIQAIKEATQAGIKIVLCTGRPMSGILPYFNE--LGLTKEEYIIMNNGCSTYSTKDWQLIDSATLTHDELIFLEEVVKEFPNVCLTLTAENTFYAVGEEVPEIVAYDADLVFT-KAKSTSLDALRNQEEIVFQAMYMGLDADVTAFQEAVEEALISKFSGVRSQDYIYEIMPQGVTKARGLKSLIAKLGLDINQVMAIGDAPNDIELLDLVPNSVAMGNASDEIKSRCKYITVDNNKAGVAKAIYDYALR |
| 2RBK Chain:A ((1-260)) | MTKALFFDIDGTLVSFETHRIPSSTIEALEAAHAKGLKIFIATGRPKAIINNLSELQDRNL--IDGYITMNGAYCFVG--EEVIYKSAIPQEEVKAMAAFCEKK-GVPCIFVEEHNISVCQPNEM-VKKIFYDFLHVNVIPTVSFEEA-SNKE-VIQMTPFITEEEEKEV---L-PSIP-TCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKHFGII |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RBK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152384 for 2321 contacts (-65.7/contact) +
2D Compatibility (PS) -27851 + (NN) -10070 + (LL) 816
1D Compatibility (HY) -11600 + (ID) 2950
Total energy: -204039.0 ( -87.91 by residue)
QMean score : 0.559
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