Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------MSKKTDTPDYKPSIYSLTRDELIAWAIEHGEKKFRASQIW-DWLYKKRVQSFDEMTNISKDFIAL------LNENFVVNPLKQRIVQESADGTVK------YLFELPDGMLIETVL------MRQY----YGLSVCVTTQVGCNIGCTFCASGLIKK-----------QRDLNNGEITAQIM--LVQKYFDERGQGERVS--------------HIVVMGIGEPFDNYTNVLKFLRT-VNDDNGLAIGARHITVSTSGLAHKIREFANEGVQVNLAVSLHAPNNELRSSIMRINRSFPLEKLFAAIEYYIET-TNRRVTFEYIMLNGVNDTPENAQELADLTKKIRKLSYVNLI-----PYNPVSEHDQY--SRSPKERVEAFYDVLKKNGVNCVVRQEHGTDIDAACGQLRSNTMKRDRQKAKVGR |
| 4O2X Chain:A ((5-483)) | EGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDG-PDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKD--PRIAATMENAQKGEIMPNIPQ------MSAFWYAVRTAVINAASGRQTVDEALAAAQTNAAANLEKIKKLRNVITSAWKVILYNDDIHNFTYVTDVIVKVVGQISKAKAHTITVEAHSTG-QALILSTWKSKAEKYCQELQQNGLTVSIIHES--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4O2X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86240 for 2649 contacts (-32.6/contact) +
2D Compatibility (PS) -36632 + (NN) -2027 + (LL) 584
1D Compatibility (HY) -8000 + (ID) 3050
Total energy: -135365.0 ( -51.10 by residue)
QMean score : 0.222
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