Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNIKRHSIFLWLTTSILAILMAVGMTIYFNTYQASPLARRIAKTATNHKNYLLFRSKGKVKANIIFYQGALVEEE--AYSQLARDLADKGYNTYILKTPLNLPVLS----------PHKAKTIINQNH---L-TNVYLAGHSLGGVVASQNAK--VAPVRGLILLASYPSRK-------------------------------------------SDLSHKKLRVLSITASNDHILNWEKYEEAKKRLPNSSTFRTIVGGNHSRFGNYGHQKGDGKATLSHKSSEKQLATFISNFIH |
| 3PFB Chain:A ((35-265)) | ------------------------------------------------VGTREEPFG-EIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSDGKFENMTVLNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDALEGNTQGVTYNPDHIPDRLPFKDLTLGGFYLRIAQQLPIYEVSAQFTKPVCLIHGTDDTVVSPNASKKYDQIYQ-NSTLHLIEGADHCFS----------------DSYQKNAVNLTTDFLQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PFB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55850 for 1476 contacts (-37.8/contact) +
2D Compatibility (PS) -18278 + (NN) -5238 + (LL) 4376
1D Compatibility (HY) -3600 + (ID) 1750
Total energy: -80340.0 ( -54.43 by residue)
QMean score : 0.453
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