Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGLLVDGKWVDQWYDTASTGGKFVRTVTQFRHWVTKDG------SAGPSGDAGFKAESGRYHLYVSLACPWASRVLIMRKLKNLESHISISIVNPLMLENGWTFQEYKGVIPDMINQSQYLYQIYQASQSDYTGRVTVPVLWDKKCHTIVNNESSEIMRMLNTAFNHIT-GNTDDYYPDSLQGQIDEMNNFIYPKINNGVYKAGFATSQNVYQKEVETLFTALDQLEKHLSDNHYLVGEQFTEADIRLFTTLVRFDTVYYGHFKCNLKALHDYPHLWHYTKRIYNLPGIAETVNFDHIKKHYYGSHKTINPTGIIPAGPNLDWTI |
3M1G Chain:A ((29-321)) | ---------------------------NYIDDRIVADVPAGSEPIAQEDGTFHWPVEAGRYRLVAARACPWAHRTVITRRLLGLENVISLGLTGPTHD-------------------------------------ITVPALVEESSKKVVTNDYPSITIDFNLEWKQFHREGAPNLYPAELREEMAPVMKRIFTEVNNGVYRTGFAGSQEAHNEAYKRLWVALDWLEDRLSTRRYLMGDHITEADIRLYPTLVRFDAVYHGHFKCGRNKITEMPNLWGYLRDLFQTPGFGDTTDFTEIKQHYYITHAEINPTRIVPVGPDLSGFA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3M1G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176810 for 2018 contacts (-87.6/contact) +
2D Compatibility (PS) -26271 + (NN) -10518 + (LL) 3792
1D Compatibility (HY) -20800 + (ID) 4900
Total energy: -235507.0 ( -116.70 by residue)
QMean score : 0.564
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