Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLIGIVGTNSNKSTNRQLLQYMQQHFADKAEIELI-EVKDLPLFNKPADKN----VPQVILDIAAKIEEADGVIIGTPEYDHSIPSALMSVLAWLSYGI-YPLLNKPVMITGASYGTLGSSRAQLQLRQILNAPELKASVLPDEFLLSHSL-QAFDK-DGNLHDIETSQKLDAIFDDFRLFVKITGKLSNARDLLQKEAENFDWESL
3SVL Chain:A ((5-184))
LQVVTLLGSLRKGSFNGMVARTLPKIAPASMEVNALPSIADIPL--YDADVQQEEGFPATVEALAEQIRQADGVVIVTPEYNYSVPGGLKNAIDWLSRLPDQPLAGKPVLIQTSSMGVIGGARCQYHLRQILV--FLDAMVMNKPEFMGGVIQNKVDPQTGEVIDQGTLDHLTGQLTAFGEFIQ------------------------
General information:
TITO was launched using:
RESULT:
Template:
3SVL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116512 for 1397 contacts (-83.4/contact) +
2D Compatibility (PS) -18875 + (NN) -8941 + (LL) 1712
1D Compatibility (HY) -12800 + (ID) 2650
Total energy: -158066.0 ( -113.15 by residue)
QMean score : 0.592
(partial model without unconserved sides chains):
PDB file :
Tito_3SVL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SVL-query.scw
PDB file :
Tito_Scwrl_3SVL.pdb
: