Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNKGLIATLILLTILVVGELFYNKSEKHLNLSEKQVVKIGILQYV-PHDALDAIEKGVEDGLAQEGYKGKKVKLTVLNAEADQSKIQAMSKQLVNHHNDILIGIATP----SAQGLAASTKDTPIIMGAVSDPLGAKLVTNMKKPTTNVTGLSNVVPTKQTVQLIKDITPNVKRIGILYASS-EDNSVSQVTEFTKYAQKAGLEVLKYSV-PSTNEIKTSMSVM--T--KKVDAVFVPQDNTIASAFRTVIVAANQ--ANIPVYSSVDTMVE---QGSIASVAQSQYGLGLETAKQAIKVLRGKPVKDVPVKVIDTGKPSLNLKAAKHLGIKIPKKIMKQAEITVKVDD |
| 3CS3 Chain:A ((5-269)) | ---------------------------------RRQTNIIGVYLADYGGSFYGELLEGIKKGLALFDYE-----MIVCSGKKSH-------LFIPEKMVDGAIILDWTFPTKEIEKFAE--RGHSIVVLDRTTEH----------RNIRQVLLDNRGGATQAIEQFVNV--GSKKVLLLSGPEKGYDSQERLAVSTRELTRFGIPYEIIQGDFTEPSGYAAAKKILSQPQTEPVDVFAFNDEMAIGVYKYVAETNYQMGKDIRIIGFDNSELGAFVQPRLATIAYSKHRWGMVAAEKIIHLMRGEAAESE-----HIYTRFIEGESFPS--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CS3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68461 for 2130 contacts (-32.1/contact) +
2D Compatibility (PS) -26384 + (NN) -2924 + (LL) 6868
1D Compatibility (HY) -4800 + (ID) 1800
Total energy: -97501.0 ( -45.78 by residue)
QMean score : 0.438
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