Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANASLRHQLFEKLDQKCDQMVAIRRYL----------HENPELSFKETKTAAYISDFYKGKDCHVQTQFGGMNGVVVDIYGDKATDKPIKHIALRADFDALPIQEETGLSFASKTAGVMHACGHDAHTAYLLILAESLIELKSEFSGHIRILHQPAEEVP-----PGGAKAMIEAGCL-----D----------------GIDAVL-------------GIHVMS---TMEEG---TVQYHAGPIQTGRATFKVILQGKGGHGSM-P-HRANDTIVAASSFVIAAQTIVSRRVNPFDTAVVTIGSFDG-KGSANVIKDSVTLEGDVRVMSEETRGVVEEEFKRILDGIAQTYGVSYQLDYQNDYPVLVNNSEVTQKVANSLKSVAIKEILDVIDCDPQTPSEDFAYYAQTIPACFFYVGAHEEGQPYYPHHHPKFQIAESSLMVSAKSMATAALAMLEEGE |
| 3N5F Chain:A ((3-407)) | ----------------QGERLWQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAGLFVYE--DAAGNLIGRKEGTN---PDATVVLVGSHLDSVYNGG----C--------FDGP---LGVLAGVEVVQTMNEHGVVTHHPIEVVAFTDEEGARFRFGMIGSRAMAGTLPPEALECRDAEGISLAEAMKQAGLDPDRLPQAARKPGTVKAYVELHIEQGRVLEETGLPVGIV--TG--IAGLIWVKFTIEGKAEHAGATPMSLRRDPMAAAAQIIIVIEEEARR----TGTTVGTVGQLHVYPGGINVIPERVEFVLDLRDLKAEVRDQVWKAIAVRAETIAKERNVRVTTERLQEMPPVLCSDEVKRAAEAACQK-L-GY-P--SFWLPSGAAHDSVQLAPICPIG-MIFVRSQD----GVSHSPAEWSTKEDCAAGAEVLYHTVWQLAQG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N5F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152632 for 2856 contacts (-53.4/contact) +
2D Compatibility (PS) -36967 + (NN) -14444 + (LL) 3332
1D Compatibility (HY) -4800 + (ID) 2750
Total energy: -208261.0 ( -72.92 by residue)
QMean score : 0.435
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