Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --M-RINKYIAHAGIASRRKAEELIKQGMVTINGQVVNELATKVKAGDLVEIEGSPIYNEEKVYYL-LNKPRGVISSVSDDKGRKTVIDLLPQVKERIYPVGRLDWDTTGLLIL-TNDGDFTDKMIHPRNEIDKVYLARIKGIATKENLRPLTRGVVIDGKKTKPARYNIIKVDHEKNRSVVELTIHEGRNHQVKK-MFEQVGLLVDKLSRTQFGTLDLTG-LRPGEARRLNKKEISQLHNAAINKS |
| 1KSK Chain:A ((1-234)) | GSHMRLDKFIAQQLGVSRAIAGREIRGNRVTVDGEIVRNAAFKLLPEHDVAYDGNPLAQQHGPRYFMLNKPQGYVCSTDDPDHPTVLYFLDEPVAWKLHAAGRLDIDTTGLV-LMTDDGQWSHRITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDLTKPAVLEVIT----PTQVRLTISEGRYHQVKRMF-AAVGNHVVELHRERIGGITLDADLAPGEYRPLTEEEIASVV------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KSK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53147 for 1564 contacts (-34.0/contact) +
2D Compatibility (PS) -24075 + (NN) -6335 + (LL) 836
1D Compatibility (HY) -12000 + (ID) 3700
Total energy: -98421.0 ( -62.93 by residue)
QMean score : 0.468
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