Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQLNQRQERIIDIIKQFQPITGELIAEKLGVTRAALRSDLAVLSMLGIIDAKPKVGYFYLGQYHASIGTSHFEKMTVSEIM-GIPLTVHQKDSVYDVIVHIFMEDAGCAFILD--DDDFLCGVVSRKDLLKTSIGGGDLSKMPIGMVMTRMPHVTTVLENESLFAAADKLVSRKVDSLPVVRHDKQYPEKFKVIGKLSKTILASLFLEIRDY--- |
2RIH Chain:A ((5-135)) | --------------------------------------------------------------------------IRTSELLKRPPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQRLDLDG-PAMPIANSPITVL---DTDPVHVAAEKMRRHNIRHVVVVNKNG------ELVGVLSIRDLCFERAILLELATA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RIH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70831 for 970 contacts (-73.0/contact) +
2D Compatibility (PS) -13213 + (NN) -2150 + (LL) 7140
1D Compatibility (HY) -4000 + (ID) 1200
Total energy: -84254.0 ( -86.86 by residue)
QMean score : 0.429
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