Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKILFFGEPLIRITPKENDYFA-DSISTKLFYGGSEVNTARALQGFGQDTKLLSALPNNPIGNSFLQFLKAQGIDTHSIQW--VGERVGLYFLEDSFACRKGEVVYDRDHSSLHDFRINQIDFDQLFEGVSLFHFSGITLSLDESIQEITLLLLKEAKKREITISLDLNFRSKLIS-PKNAKILFSQFATFADICFGIEPLMVDS-QDTTFFNRDEATIEDVKERMISLINHFDFQVIFHTKRLQDEWGRNHYQAYIANRKQEFVTSKEITTAVNQRIGSGDAFVAGALYQLLQHSDSKTVIDFAVASASLKCALEGDNMFETV-TAVNKVLNQSKDIIR |
| 2QCV Chain:A ((11-328)) | EFDLIAIGRACIDLNAVEYNRPMEETMTFSKYVGGSPANIVIGSSKLGLKAGFIGKIADDQHGRFIESYMRGVGVDTSNLVVDQEGHKTGLAFTEIKSPE-ECSILMYRQDVADLYLSPEEVNEA-YIRRSKLLLVSGTALSKSPS-REAVLKAIRLAKRNDVKVVFELDYRPYSWETPEETAVYYSLVAEQSDIVIGTREEFDVLENRTEK--------GDNDETIRYLFKH-SPE-----LIVIKHGVEG---SFAYTKAGEAYRGYAYKTKVLKTFGAGDSYASAFLYALISGKGIETALKYGSASASIVVSK-----AMPSVEEIEALIEKDETITI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QCV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114171 for 2783 contacts (-41.0/contact) +
2D Compatibility (PS) -32155 + (NN) -7162 + (LL) 2000
1D Compatibility (HY) -10800 + (ID) 2750
Total energy: -165038.0 ( -59.30 by residue)
QMean score : 0.465
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