Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----MIKILAACGAGVNSSHQIKDAIETQLGDR-GYNVHCDA------VMVK-------------DITEEMVNKYDIFT-PIAKTDLGFNVPIPVVEAGPILYRIPVMSEPVFTALEQVIK--EHNLS-------------------------
2OST Chain:A ((1-148))
MGSTKLKGDIAQQAAIMRALKMGWGVLKPLGDRLSYDLVFDVEGILLKVQVKSSWKSEKTGNYVVDNRRTRTNRRNIVRSPYRGND--FDFAVAYVEELELFYVFP---VDVFISYGSEIHLVETDKRQRKPRSFGYREAWHLILQKGAAQKE
General information:
TITO was launched using:
RESULT:
Template:
2OST.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41224 for 542 contacts (-76.1/contact) +
2D Compatibility (PS) -10381 + (NN) -1339 + (LL) 376
1D Compatibility (HY) -6000 + (ID) 1300
Total energy: -59868.0 ( -110.46 by residue)
QMean score : 0.164
(partial model without unconserved sides chains):
PDB file :
Tito_2OST.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OST-query.scw
PDB file :
Tito_Scwrl_2OST.pdb
: