Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQIDSIDFQILQLLNKNARIQWKEIGEKIHMTGQAVGNRIKKMEDNGIIKAYSIVVDELKMGFSFTAFVFFFMNA--YMHDDLLKFIATRNEISEAHRVSGDACYLLKVTVHSQEVLNHLLN-DLLKYG---NYQLYLSIKEVKKHYNTSLMSDE
2P5V Chain:A ((7-159))-TLDKTDIKILQVLQENGRLTNVELSERVALSPSPCLRRLKQLEDAGIVRQYAALLSPESVNLGLQAFIRVSIRKAKDAREDFAASVRKWPEVLSCFALTGETDYLLQAFFTDMNAFSHFVLDTLLSHHGVQDAQSSFVLKEIKHTTSLPLNHL-


General information:
TITO was launched using:
RESULT:

Template: 2P5V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 464 -98714 -212.75 -671.52
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -212.75
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.471

(partial model without unconserved sides chains):
PDB file : Tito_2P5V.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2P5V-query.scw
PDB file : Tito_Scwrl_2P5V.pdb: