Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDTYSVFTTKWKQLTGVDLTLYKEAQMKRRLTSLYEKKGFQSFKDFAAALEKDQALLNETLDRMTINVSEFYRNYKRWEVLETAILPLIKTSRPLKIWSAACSTGEEPYTLAMLLDQQKGLPGYQILATDIDEKALEKAKKGVYQERSLQEVPLSVKDRYFTQNANRSYEVKTEIKKNITFKKHNLLADRY-EQDFDLIVCRNVFIYFTESAKEELYLKMAHSLKKNGVLFVGSTEQIFNPEKFGLVPADTFFYQKR
3EGE Chain:A ((34-133))--------------------------------------------------------------------------------------------KGSVIADIGAGTGGY----SVALANQG----LFVYAVEPSIVMRQQAVVHP----------------------------------QVEWFTGYAENLALPDKSVDGVISILAIHHFSHL--EKSFQEMQRIIRDGTIVLLTFDI---------------------


General information:
TITO was launched using:
RESULT:

Template: 3EGE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 487 -56067 -115.13 -566.33
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -115.13
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.547

(partial model without unconserved sides chains):
PDB file : Tito_3EGE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3EGE-query.scw
PDB file : Tito_Scwrl_3EGE.pdb: