Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKTDRHPVSGANSLWHVYQTVPFLKVVKNFIVIQIARYTPFIGMKNWLYRTFLRMKVGKQTSFALMVMPDIMFPEKISVGTNTIIGYNTTILAHEYLIH-------EYRIGKVLIGDEVMIGANTTILPGVKIGDGAVVSAGTLVHKDVPDGAFVGGNPMRIIYTKEEMQERLKKSAE
1KRR Chain:B ((84-190))-------------------------------------------------------------ANFNLTIVDDYT----VTIGDNVLIAPNVTLSVTGHPVHHELRKNGEMYSFPITIGNNVWIGSHVVINPGVTIGDNSVIGAGSIVTKDIPPNVVAAGVPCRVI---REINDRDK----


General information:
TITO was launched using:
RESULT:

Template: 1KRR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 486 -28927 -59.52 -289.27
target 2D structure prediction score : 0.39
Monomeric hydrophicity matching model chain B : 0.67

3D Compatibility (PKB) : -59.52
2D Compatibility (Sec. Struct. Predict.) : 0.39
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.411

(partial model without unconserved sides chains):
PDB file : Tito_1KRR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1KRR-query.scw
PDB file : Tito_Scwrl_1KRR.pdb: