Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTAISCSPRPRYASRMPVLSKTVEVTADAASIMAIVADIERYPEWNEGVKGAWVLARYDDGRPSQVRLDTAVQGIEGTYIHAVYY-PGENQIQTVMQQGELFAKQEQLFSVVATGAASLLTVDMDVQVT------MPVPEPMVKMLLNNVLEHLAENLKQRAEQLAAS-
2RER Chain:A ((1-155))
--------------MAARTDNSIVVNAPFELVWDVTNDIEAWPELFSEYAEAEILRQDGDGFDFRLKTRPDANGRVWEWVSHRVPDKGSRTVRAHRVETGPFAYMNLHWTYRAVAGGTEMRWVQEFDMKPGAPFDNAHMTAHLNTTTRANMERIKKIIEDRHREGQRTP
General information:
TITO was launched using:
RESULT:
Template:
2RER.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53711 for 981 contacts (-54.8/contact) +
2D Compatibility (PS) -16135 + (NN) -6279 + (LL) 736
1D Compatibility (HY) -400 + (ID) 900
Total energy: -76689.0 ( -78.17 by residue)
QMean score : 0.318
(partial model without unconserved sides chains):
PDB file :
Tito_2RER.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RER-query.scw
PDB file :
Tito_Scwrl_2RER.pdb
: