Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLT---DTPPEALADMVAIGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRRDPDREATGRILREALAQQDAAAQD
4ZKV Chain:B ((18-120))
---IFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDESLLGHLMIVGK---KCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVLGGRQ--------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4ZKV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66466 for 684 contacts (-97.2/contact) +
2D Compatibility (PS) -10785 + (NN) -5033 + (LL) 3280
1D Compatibility (HY) -8400 + (ID) 1850
Total energy: -89254.0 ( -130.49 by residue)
QMean score : 0.443
(partial model without unconserved sides chains):
PDB file :
Tito_4ZKV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ZKV-query.scw
PDB file :
Tito_Scwrl_4ZKV.pdb
: