Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDVARLLALRSFTELGARQRARALLDAGSFRELLDPF---AGVQSP----W-LERQGIVPQADDGVVVARGLLDGQPAVLAAIEGAFQGGSLGEVSGAKIAGALELAAEDNRNGVPTRALLLLETGGVRLQEANLGLAAIAEIQAAIVDLQR-YQPVVAVIAGPVGCFGGMS-IAAGLCSYVLVTREARLGLNGPQVIEQEAGIAEYDSRDRPFIWSLTGGEQRFASGLADAYLADDLDEVRTSVLAYFAKGLPARPRCRRAEDYLRRLGDLDTAEQPDAAGVRRLYQGLGQGDAT |
| 2F9Y Chain:B ((44-265)) | ----EVCPKCDHHMRMTARNRLHSLLDEGSLVELGSELEPKDVLKFRDSKKYK----QKETGEKDALVVMKGTLYGMPVVAAAFEFAFMGGSMGSVVGARFVRAVEQALE-----DNCPLICFSASGGARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDP--TMGGVSASFAMLGDLNIAEPKALIGFAGPRVIEQTVREK-LPP-------GFQRSEFLIEKGAIDMIVRRPEMRLKLASILAKLMNLPAPNP-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F9Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101725 for 1685 contacts (-60.4/contact) +
2D Compatibility (PS) -22852 + (NN) -7778 + (LL) 3748
1D Compatibility (HY) -10400 + (ID) 3200
Total energy: -142207.0 ( -84.40 by residue)
QMean score : 0.403
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