Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSPPKIRRYIPADRDATLAIWLEASRVGHGFLG-EAELQKQKALVRDH-YLDASETWLALDGDTPLGFIGLLD-------AFIGGLFVAPTAHGRGIGRQLVEHAATLK---GALEVEVYAANREALGFYARCGFVESGRRPRDDEGRALEIVQLRREH
3EXN Chain:A ((10-149))
--LTLDLAPVTPKDAPLLHRVFHLSPSYFALIGMELPTLEDVVRDLQTLEVDPRRRAFLLFLGQEPVGYLDAKLGYPEAEDATLSLLLIREDHQGRGLGRQALERFAAGLDGVRRLYAVVYGHNPKAKAFFQAQGFRYVKDGGPTLTWYVRPL-------
General information:
TITO was launched using:
RESULT:
Template:
3EXN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53151 for 879 contacts (-60.5/contact) +
2D Compatibility (PS) -14078 + (NN) -7605 + (LL) 20
1D Compatibility (HY) -4800 + (ID) 1250
Total energy: -80864.0 ( -92.00 by residue)
QMean score : 0.373
(partial model without unconserved sides chains):
PDB file :
Tito_3EXN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EXN-query.scw
PDB file :
Tito_Scwrl_3EXN.pdb
: