Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLPAAPKVPPQVAEQAVRWLVELQGGADDERLRQAWQRWRQAAPEHEQAWRHIEAVNQRLAGIGTPLALAAINAPHSPQRRR--ALKTLLLVLAAGG---SAW---GLRESGSLQR----WSADYATGVGERRRLALADGSRLELNSDTAVDVRFDAGERRLL-----------LLR----GEIQLSTGHDPRPLHVYSAEGRLRPVGTR-FDVRQFAGRTRVAVHEGA--VQVE-NRAGQGLLLPS---GRQLDFDRE--RLGAPQPLPVGSGAWTD-----GML-------VAAGMRLDEFLAEVARYRPGRLGCDPRIGGLRISGSYPLDDSERIL--ATL-PAVLPVEVRRVTRYWVGVHPRE--------------------------------------------- |
| 3WJ9 Chain:A ((3-412)) | --------QKSQFAYRSSKSIGLVNASEN-------YASPPKFEAISEPARNACYSPNGKLFAYATATQVVINDTESGAKLTQLPAANTYELGFSPLGKYLSTWERPGKEADGTPKQNMKVWNTETGQLVFSFVQRNQ-TGWNLQYTCDESLAARLVTNEVHFYETGNMSKGPIAKLRVEGISDFALSPGQN-HAVAVFIPEKKGAPASVRTYSIPNFNSPLSQKTFFKADKVQFKWNALGTSLLVLTQDKSNKNYYGETTGQFDLDREGPIHDVCWNADSKEFGIVYGYMPAKTAIFDNRANVVSIIPPAPRNTLIFSPNSRYILLAGFGNLQGSIDIFDAANNMKKITTVEAANCTYCEFSPDSQFLLTAVTSPRLRVDNSIKIWHITGAPMFYEEFNELYQAFWRPRPLN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WJ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29438 for 1994 contacts (-14.8/contact) +
2D Compatibility (PS) -30663 + (NN) -2567 + (LL) 1100
1D Compatibility (HY) -7600 + (ID) 2650
Total energy: -71818.0 ( -36.02 by residue)
QMean score : 0.130
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