Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNLIISVEG-DLVVIRSESTFKNTEISFKLGVEFDEITPDDRKVKSIITLDGGVLVHVQKWDGKSTTIKKRRDGDKLVVECVMKGVTSTRVYERA |
1O8V Chain:A ((4-133)) | -MEAFLGTWKMEKSEGFDKIMERLGVDFVTRKMGNLVKPNLIVTDLGGGKYKMRSESTFKTTECSFKLGEKFKEVTPDSREVASLITVENGVMKHEQDDKTKVTYIERVVEGNELKATVKVDEVVCVRTYSKV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O8V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 25285 for 912 contacts (27.7/contact) +
2D Compatibility (PS) -13614 + (NN) 2681 + (LL) 208
1D Compatibility (HY) 9600 + (ID) 350
Total energy: 23810.0 ( 26.11 by residue)
QMean score : 0.100
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