Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKLIFLIVIALVLSACNSNSSHAKELNDLEKKYNAHIGVYALDTKSGKEVKFNSDKRFAYASTSKAINSAILLEQV--PYNKLNKKVHINKDDIVAYSPILEKYVGKDITLKALIEASMTYSDNTANNKIIKEIGGIKKVKQRLKELGDKVTNPVRYEIELNYYSPKSKKDTSTPAAFGKTLNKLIANGKLSKENKKFLLDLMLNNKSGDTLIKDGVPKDYKVADKSGQAITYASRNDVAFVYPKGQSEPIVLVIFTNKDNKSDKPNDKLISETAKSVMKEF |
1HZO Chain:A ((4-263)) | --------------------NTIEEQLNTLEKYSQGRLGVALINTEDNSQITYRGEERFAMASTSKVMAVAAVLKASEKQAGLLDKNITIKKSDLVAYSPITEKHLTTGMTLAELSAATLQYSDNTAMNKILDYLGGPAKVTQFARSINDVTYRLDRKEPELNTAIHGDPRDTTSPIAMAKSLQALTLGDALGQSQRQQLVTWLKGNTTGDNSIKAGLPKHWVVGDKTGSG-DYGTTNDIAVIWPENH-APLILVVYFTQQEQNAKYRKDIIAKAAEIVTKE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HZO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34801 for 2324 contacts (-15.0/contact) +
2D Compatibility (PS) -28200 + (NN) -16304 + (LL) 2604
1D Compatibility (HY) -14400 + (ID) 4500
Total energy: -95601.0 ( -41.14 by residue)
QMean score : 0.746
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