Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ASPDWGYDD--K----NGPEQWSKLYPIANGNNQSPVDIKTSETKHDTSLKPISVSY-NPATAKEIINVGHSFHVNFEDNDNRSVLKGGPFSDSYRLFQFHFHWGSTNEHGSEHTVDGVKYSAELHVAHWNSAKYSSLAEAASKADGLAVIGVLMKVG-EANPKLQKVLDALQAIKTKGKRAPFTNFDPSTLLPSS---LDFWTYPGSLTHPPLYESVTWIICKESISVSSEQLAQFRSLLSNVEGDNAVPMQHNNRPTQPLKGRTVRASF |
3FW3 Chain:A ((5-266)) | ----WCYEVQAESSNCLVPVKWG---GNCQKDRQSPINIVTTKAKVDKKLGRFFFSGYDKKQTWTVQNNGHSVMMLLENK---ASISGGGLPAPYQAKQLHLHWSDLPYKGSEHSLDGEHFAMEMHIVHEKEK----------PEDEIAVLAFLVEAGTQVNEGFQPLVEALSNIPKPEMSTTMAESSLLDLLPKEEKLRHYFRYLGSLTTPTCDEKVVWTVFREPIQLHREQILAFSQKLYYDKEQT-VSMKDNVRPLQQLGQRTVIKS- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3FW3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -59758 for 1927 contacts (-31.0/contact) +
2D Compatibility (PS) -25648 + (NN) -13830 + (LL) 1236
1D Compatibility (HY) -15200 + (ID) 3650
Total energy: -116850.0 ( -60.64 by residue)
QMean score : 0.633
|
|
|