Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKLE
4IPX Chain:A ((1-107))
-GVQVETISPGDGRTFPKRGQTVVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGVPGIIPPHATLVFDVELLKLE
General information:
TITO was launched using:
RESULT:
Template:
4IPX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53395 for 793 contacts (-67.3/contact) +
2D Compatibility (PS) -11901 + (NN) -5079 + (LL) 208
1D Compatibility (HY) -13600 + (ID) 5250
Total energy: -89017.0 ( -112.25 by residue)
QMean score : 0.698
(partial model without unconserved sides chains):
PDB file :
Tito_4IPX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IPX-query.scw
PDB file :
Tito_Scwrl_4IPX.pdb
: