Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDAVSSDRNFPNSTNLPRNPSMADYEARIFTFGTWIYSVNKEQLARAGFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIHLTHSLEECLVRTT
4EC4 Chain:K ((6-112))
------SDRNFPNSTNLPRNPSMADYEARIFTFGTWIYSVNKEQLARAGFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIHLTHSLEECL----
General information:
TITO was launched using:
RESULT:
Template:
4EC4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18115 for 763 contacts (-23.7/contact) +
2D Compatibility (PS) -11710 + (NN) -8419 + (LL) 808
1D Compatibility (HY) -14000 + (ID) 5350
Total energy: -56786.0 ( -74.42 by residue)
QMean score : 0.416
(partial model without unconserved sides chains):
PDB file :
Tito_4EC4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EC4-query.scw
PDB file :
Tito_Scwrl_4EC4.pdb
: