Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGNCLHRAELSPSTENSSQLDFEDVWNSSYGVNDSFPDGDYGANLEAAAPCHSCNLLDDSALPFFILTSVLGILASSTVLFMLFR---PLFRWQLCPGWPVLAQLAVGSALFSIVVPVLAPGLGSTRSSALCSLGYCVWYGSAFAQALLLGCHASLGHRLGAGQVPGLTLGLTVGIWGVAALLTLPVTLASGASGGLCTLIYSTELKALQATHTVACLAIFVLLPLGLFGAKGLKKALGMGPGPWMNILWAWFIFWWPHGVVLGLDFLVRSKLLLLSTCLAQQALDLLLNLAEALAILHCVATPLLLALFCHQATRTLLPSLPLPEGWSSHLDTLGSKS |
1T3L Chain:A ((10-330)) | LEEDREAVRREAERQAQAQLEKAKTKPVAFAVRTNV---SYSAAHEDDVPVP------GMAISFE-AKDFLHVKEKFNNDWWIGRLVKEGCEIGFIPSRVKLENMRLQHEQRAKEFKLTPPYDVVPSMRPVVLVGPSLKGYEVTDMMQKALFDFLKHRFEGRISITRVTADISLAKRSVLNNPSKHAIIERSNTRS-SLAEVQSEIERIFELARTLQLVVLDADTI-----NHPAQLSKTSLAP-------IVVYVKISSPKVLQRLIKSRG--------KSQAKHLNVQMVAADKLAQCPPELFDVILDENQLEDACEHLADYLEAYWKATHPPSS-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1T3L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -198570 for 2228 contacts (-89.1/contact) +
2D Compatibility (PS) -31433 + (NN) -1088 + (LL) 2284
1D Compatibility (HY) 2400 + (ID) 1500
Total energy: -227907.0 ( -102.29 by residue)
QMean score : 0.119
|
|
|