Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAPSHRASQVGFCPTPERPLWRLPPTCRPRRMSVCYRPPGNETLLSWKTSRATGT--AFLLLAALLGLPGNGFVVWSLAGWRPARGRPLAATLVL------HLALADGAVLLLTPLFVAFLTRQAWPLGQAGCKAVYYVCALSMYAS-------VLLTGLLSLQRCLAVTRPFLAPRLRSPAL------ARRLLLAVWLAALLLAVPAAVYRHLWRDRVCQLCHPSPVHAAAHLSLETLTAFVLPFGLMLGCYSVTLARLRGARWGSGRHGARVGRLVSAIVLAFGLLWAPYHAVNLLQAVAALAPPEGALAKLGGAGQAARAGTTALAFFSSSVNPVLYVFTAGDLLPR-------AGPRFLTRLFEGSGEARGGGRSREGTMELRTTPQLKVVGQGRGNGDPGGGMEKDGPEWDL------------ |
| 4D10 Chain:C ((3-403)) | SALEQFVNSVRQLSA------------QGQMTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLFVKFSMPSVPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPL--RGIGILKQAIDKMQMNTNQLTSIHADLCQLCLLAKCFKPALPYLDVDMMDICKENGAYDAKHFLCYYYYGGMIYTGLKNFERALY---FYEQAITTPAMAVSHIMLESYKKYILVSLILLG----------KVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVNKHSETFTRDNNMGLVKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIED-GEIFASINQKDGMVSFHDNPEKYNNPAMLHNIDQEMLKCIELDERLKAMDQEITVNPQF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D10.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -223501 for 2526 contacts (-88.5/contact) +
2D Compatibility (PS) -36789 + (NN) -5491 + (LL) 1464
1D Compatibility (HY) -12000 + (ID) 2800
Total energy: -279117.0 ( -110.50 by residue)
QMean score : 0.209
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