Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLGLNHTSMSEFILVGFSAF---PHLQLMLFLLFLLMYLFTLLGNLLIMATVWSERSLHTPMYLFLCVLSVSE---------ILYTVAIIPRMLADLLSTQRSIAF------------LACASQMFFSFSFGFTHSFLLTVMGYDRYVAICHPLRYNVLMSPRGCACLVGCSWAGGSVMGMVVTSAIFQLTFCGSHEIQHFLCHVPPLLKLACGNNVPAVALGVGLVCIMALLG------CFLLILLSYAFIVADILKIPSAEGRNKAFSTCASHLIVVIVHYGFASVIYLKPKGPHSQEGDTLMATTYAVLTPFLSPIIFSLRNKELKVAMKRTFLSTLYSSGT |
1DMU Chain:A ((1-299)) | MYNLHREKIFMSYNQNKQYLEDNPEIQEKIELYGLNLLNEVISDNEEEIRADYNEANFLHPFWMNYPPLDRGKMPKGDQIPWIEVGEKAVGSKLTRLVSQREDITVREIGLPTGPDERYLLTSPTIYSLTNGFTDSIMMFV---DIKSVGPRDSDYDLVLSPNQVS-------GNGDWAQLEGGIQNNQQTIQGPRSSQIFLPTIPPLYILSDGTIAPVVHLFIKPIYAMRSLTKGDTGQSLYKIKLASVPNGLGLFCNP-----GYAFDSAYKFLFRP----------------GKDDRTKSLLQKRVRVDLRVLDKI----GPRVMTIDMDK----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DMU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -326614 for 2087 contacts (-156.5/contact) +
2D Compatibility (PS) -28609 + (NN) -8159 + (LL) 2760
1D Compatibility (HY) -9200 + (ID) 2700
Total energy: -372522.0 ( -178.50 by residue)
QMean score : 0.193
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