Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLWMESHLIVPETRPSPRMMSNQTLVTEFILQGFSEHPEYRVFLFS-----CFLFLYSGALTGNV----LITLAITFNPGLHAPMYFFLLNLATMD-----IICTSSIMPKALAS-------------------LV----SEESSISYGGCMAQLYFLTWAASSELLLLTVMAYDRYAAI--CHPLHYSSMMSKVFCSGLATAVWLLCAVNTAIHTGLMLRLDFCGPNVIIHFFCEVPPLL------LLSCSSTYVN--GVMIVLADAFYGIVNFLMTIAS-------------YGFIV-----SSILKVKTAWGRQKAFSTCSSHLTV----VCMYYTAVF---YAYISPVSGYSAGKSKLAGLLYTVLSPTLNPLIYTLRNKEVKAALRKLFPFFRN--------------------------------------------------------------------- |
4G9K Chain:A ((1-471)) | ------MKVIDPQHSDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEAEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAFAGLPPTAQVAHQEAEYLAKNFDKMAQIPNFQKIDLLFEENNFKPFKYNDLGALAYLGSERAIATIRSGKRTFYTGGGLMTFYLWRILYLSMILSARSRLKVFFDWIKLAFFKRDFFKGL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G9K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -322023 for 2390 contacts (-134.7/contact) +
2D Compatibility (PS) -33937 + (NN) -56 + (LL) 916
1D Compatibility (HY) -4800 + (ID) 2500
Total energy: -362400.0 ( -151.63 by residue)
QMean score : 0.132
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