Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------MRPSSNVTEFVLLGLTQDPDVKKTLFVMFLLIYIVTMVGNLLIWVTTIGSPSLGSLMYFFLAY----LSLMDAIYSTAMSPKLMIDLLCDKIAISLSACMGQLFIEHL-LGGAEVFLLVVMAYDRYVAISKPLHYLNIMNRLVCILLLVVAMIGGFVHSVV--------------------------QIVFLYSL---------PICGPNVIDHSVCDMYPLLELLCLD--------------TYFIGLTVVANGGIICMVIFTFLLISCGVILNFLKTYSQEERHKALPTCISHIIVV-ALVFVPCIFMYVRPVSNFPFDKLMTVFY--------SIITLMLNPLIYSLRQS----------------------EMKNAMKNLWC-----EKLSIVRKRVSPTLNIFIPSSKATNRR-- |
| 4ZFV Chain:A ((10-445)) | NVLDFTVLGLNSGTSMDGIDCALCHFYQKTPDAPMEFELLEYGEVPLAQPIKQRVMRMILEDTTSPSELSEVNVILGEHFADAVRQFAAERNVDLSTIDAIASHGQTIWLLSMPEEGQVKSALTMAEGAILASRTGITSITDFRISDQAAGRQGAPLIAFFDALLLHHPT--KLRACQNIGGIANVCFIPPDVDGRRTDEYYDFDTGPGNVFIDAVVRHFTNGEQEYDKDGAMGKRGKVDQELVDDFLKMPYFQLDPPKTTGREVFRDTLAHDLIRRAEAKGLSPDDIVATTTRITAQAIVDHYRRYAPSQE-------IDEIFMCGGGAYNPNIVEFIQQS--YPNTKIMMLDEAGVPAGAKEAITFAWQGMEALVGRSIPVPTRVETRQHYVLGKVSPGLNYRSVMKKGMAFGGDAQQLPWVSEMIVKKKGKVITNNWAGSHHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZFV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -317502 for 2232 contacts (-142.2/contact) +
2D Compatibility (PS) -32059 + (NN) -1187 + (LL) 548
1D Compatibility (HY) 2800 + (ID) 2800
Total energy: -350200.0 ( -156.90 by residue)
QMean score : 0.133
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