Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEPRKN-VTD-FVLLGFTQNPKEQKV--------------LFVMFLLFYILTMVG-NLLIVVTVTVSETLGSPMYFFLAGLSFIDI-IYSSSISPRLIS--GLFFGNNSISFQSCMAQLFIEHIFGGSEVFLLLVMAYDCYVA-ICKPLHYLVIMRQW---VCVVLLVVSWV-------G-GFLHSVFQLSIIYGLP--------------------------------FCGPNVIDH-------------FFCDMYPLLKLVCTDTHA----------------IGLLVVAN--GGLACTIVFLLLLISYGVILHSLKNLSQKGRQKALSTCSSHMTVVVFFFVPCIFMYARPARTFPIDKSVSVFYTVITPMLNPLIYTLRNSEMTSAMKKLWRRDLISSST----- |
| 4KQ7 Chain:A ((2-374)) | ---QSNMTNEMFDLAKLKSGVKNKRISSTDPTGGNRDHLEPFKPGEKRIIADIKGMGVINHIWVTIAPPPPT-----LSRNDIIIRMYWDGNDYPSVESPIGPFFGQGWDERYNYASLPLSAGPENGT--------GLSCYFAMPFEKGARIEIENQSDRNIDAFYFYVDYLEMAKLPKDMGRFHAWYNHNLTEALPEGETEWGVTGAQKPNTTGERNYVFMETQGKGHFVGINYYVHCPTPMWYGEGDDMWFIDGEKVPSLIGTGTEDFFNTAWCPKEAFSHPYFGYPRVNNDIGWLGRTHVYRFFIEDPIFFEKSLKGTIEHGSNNNLTL---DLSTVAYWYQD-------SAVALPEAPT--------KAQRAPKPFI--NHVDIHRWRDAWRKSKGNKATLWGNE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KQ7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -235847 for 1848 contacts (-127.6/contact) +
2D Compatibility (PS) -29877 + (NN) 1983 + (LL) 4192
1D Compatibility (HY) -4400 + (ID) 2850
Total energy: -266799.0 ( -144.37 by residue)
QMean score : 0.272
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