Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MLQNQD--TMEILSNSTSKFPTFLLTGIPGLE----SAHVWISIPFCCFYAIALSGNSVILFVIIT-QQSLHEPMYYFLFRLS-ATDLGLTVSSLSTTLGILWFEAREISLYSCIVQMFFLHGFTFMESGVLVATAFDRYVAICDPLRYTTILTNSRIIQMGLLMITRAIVLILP--LLLLLKPLYFCRMNALSHSYCYHPDVIQLACSDIRANSICGLIDLILTTG------IDTPCIVLSYILIIH-SVLRIASPEEWHKVFSTCVSH--VGAVAFFYIHMLSLSLVYRYGRSAPRVVHSVMANVYLLLPPVL----NPIIDSVKTKQIRKAMLSLLLTK |
| 4CZX Chain:A ((1-324)) | PHMMDSRDWTQLGCVAYPSPIHPDYHAGPASTIAFDNQDELLWIGTQK--GFAGSFIGRELKRFTAFRIHPETDGPLRQFLFVDKGVIFLGSRSVYMAARSGVPIWSIRHESMQDLRAMSFTSKG----TSEILVAG-WQNKMLVIDVNKGEVVKELPTQDQYSFLKMSRYICAATNKGTVNILDPITFT----IKKQWQAHGAFINDLDTSN---------DFIVTCGGSHRQTHNTPAILDPYVKVFDLKNMSAMNPVPFAPLAAHVRMHPRMLTTAIVVNQAGQIHVTDLLNPSNSQVCYTQPQGVVLHFDVSRTGEGKALADNKHNTYVWGSPNKIQFTE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CZX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -322042 for 2466 contacts (-130.6/contact) +
2D Compatibility (PS) -31305 + (NN) 7546 + (LL) 1756
1D Compatibility (HY) -4000 + (ID) 2500
Total energy: -350545.0 ( -142.15 by residue)
QMean score : 0.120
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