Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MLPS---------NITSTHPAVFLLVGIPGLEHLHAWISIPFCFAYTLALLGNCTLLFIIQADA---------ALHEPMYL---FLAMLATIDLVLSSTTLPKMLAIFWFRDQEINFFACLVQMFFLHSFSIMESAVLLAMAFDRYVAICKPLHYTTVLTGSL---------------ITKIGMAAVARAVTLMTPLPFLLRRFHYCR-GPVIAHCYCEHMAVVRLACGDTSFNNIYGIAVAMFIVVLDLLFVILSYVFILQAVLQLASQEARYKAFGTCVSHIGAILS----TYTPVVISSVMHRVARHA-------APRVHILLAIFYLL----FPPMVNPIIYGVKTKQIREYVLSLFQRKNM |
| 5CQC Chain:A ((22-402)) | SIYPPETSWEVNKGMNSSRLHKLYSLFFDKSSAFYLGDDVSVLLTGAYGFQSKKNDQQIFLFRPDSDYVAGYHVDAKSDAGWVNDKLDRRLSEISEFCSKATQP------------ATFILPFVEMPTDITKGV-QHQVLLTISYDPKSKQLTPTVYDSIGRDTYSESLSSYFKGKYRTTCDEILTQSIEKAIKSTDFTLGKFTRAAYNTEGNCGSYTFRTIKEVISSSAQGTTSNS-YLTSQHVQDIESCIKYRNLGVVDIESALTEGKTLPVQLSEFIVALEDYGKLRSQQYSKTAKLTAVELLIGILNDIKGKNEISESQYDKLVKEVDCLMDSSLGKLVQFHLKNLGAESLQKLVLPCVKFD-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5CQC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -365715 for 2210 contacts (-165.5/contact) +
2D Compatibility (PS) -29987 + (NN) 6049 + (LL) 2004
1D Compatibility (HY) -6400 + (ID) 2350
Total energy: -396399.0 ( -179.37 by residue)
QMean score : 0.170
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