Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSASNIT-LTHPTAFLLVGIP--------GLEHLHIWISIPFCLAYTLALLGNCTLLLIIQADAALHEPMYLFLAMLAAIDLVLSS-----SALPKMLAIFWFRDREI--NFFACLAQMFFLH----SFSIMESAVLLAMAFDRYVAICKP--------LHYTKVL-----TGSLITKIGMAAVARAV---------------TLMTPLPFLLRCFHYCRGPVIAHCYCEHMAVVRLA--CGDTSFNN---IYGIAVAMFIVVLDLLLVILSY---IFILQAVLLLASQEARYKAFGTCVSHIGAILAF---YTTVVISSVMHRVARHAAPHVHILLANFYLLFPPMVNPIIYGVK--TKQIRESILGVFPRKDM------ |
| 3ES5 Chain:A ((42-420)) | MRLGWIDPLPQVDTIFPLGLEPNVESIPAGEVELDFNLPETIAKPFADTVTSVGDRIQLVDDDKENIATSIYGLSFFKAARQLYSTMLDHEKAVNQPLKAVYYDETPIPAHMSGALGIIGHMKTKVGDVLVKDAGVLFKRGTAAGVTKFSEIDNDKTWNLDCSKLVWADHSSLSMIKRLASEKISQLVKQRYRVTDAQGHVYSVSMPQLTDQALPDYYDSIPDVAP-NSDQLRVLTAALQMSLAQFRNDELPHDEDRSDLLTTLDLLYADGAYEISALRDQFELLMARYTTDFKWRVESIFKVGPPPAGTTGYGAQTVSST-GNTARWQFPLSDADINIGYLFSPSKSFSLFPKMVGYSKRAREDASASFANSDAKKFYAD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ES5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -360261 for 2271 contacts (-158.6/contact) +
2D Compatibility (PS) -32009 + (NN) -4346 + (LL) 264
1D Compatibility (HY) -2800 + (ID) 2850
Total energy: -402002.0 ( -177.02 by residue)
QMean score : 0.234
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