Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLDSFFSFLLKSLIMALSN----SSWRLP-QPSFFLVGIPGLEESQHWIALPLGILYLLALVGNVTILFIIWMDPSLHQSMYLFLSMLAAIDLVVASSTAPKALAVLLVRAQEIGYTVCLIQMFFTHAFSSMESGVLVAMALDRYVAICHPLHHSTILHPGVIGHIGMVVLVRG----------------LLLLIPFLILLRKLIF-CQATIIGHAYCEHMAVVK-----LACSETTVNRAYGLTVALLVVGLDVLAIGVSYAHILQAVLKVPGNEARLKAF-S-TCGSHVCVILVFYIPGMFSFLTH-RFGH-HVPHHVHVLLAILYRLVPPALNPLVYRVKTQKIHQ--------------- |
| 4PE6 Chain:A ((18-339)) | ------------KPFIALSNGFIGNGWRQTMIAKFEEAAKQAQADG---------------LIGKYKVVNAPGNNSATEQVAQIKSLLLQKPDALLINPASPTALQPVIQQACDAGVKVVVFD----SAIDAPCAYILQNSFVDWATYAAKPVLES-------IGGKGNVIVVRGVVGSQPEAEMYETTKKILAEYPQVKTVATVTGMCDGATAQKAVLGVLPSVSTVDAVIGCGD-----GYGVAQAFATAGKPIPAVTFETNGRALSYWKDNKIDNGSVAVMSDPAQSVAALWAALDLLEGRDLPKQMTFPIVLIEEKDRDTWASVLKPDEYAAWPWTRELFRQQVEAIKTGGEPVQPPIPST |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PE6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -224704 for 2201 contacts (-102.1/contact) +
2D Compatibility (PS) -27728 + (NN) 798 + (LL) 3856
1D Compatibility (HY) 16800 + (ID) 1300
Total energy: -232278.0 ( -105.53 by residue)
QMean score : 0.050
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