Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------MLTFHNVCSVPS--SFWLTGIPGLESLHVWLSI-----PFGSMYLVAVV-----GNVTILAVVKIERSLHQPMYFFLCMLAAIDLV-LSTSTIPKLLGIFWFGACDIGLDACLGQMFLIHCFATVESGIFLAMAFDRYVAICNPLRHSMVLTYTVVGRLGLVSLLRGVLYIGPLPLMIRLRLPLYKTHVISHSYCEHMAVVALTCGDSRVNNVYGLSIGFLVLILDSVAIAASYVMIFRAVMGLATPEARLKTLGTCASHLCAILIFYVPIAVSSLIHRFGQCVPPPVHTLLANFYLLIPPILNPIVYAVRTKQIRESLLQIPRIEMKIR--- |
| 4P5W Chain:A ((31-394)) | TKRADPAELRTIFLKYASIEKNGEFFMS---PNDFVTRYLNIFSQPNPKTVELLSGVVDQTKDGLISFQEFVAFESVLCAPDALFMVAFQLFDKAGKGEVTFEDVKQVFGQTTIHQHIPFNWDSEFVQLHFGKERKRHLTYAEFTQFLLEIQLEHAKQAFVQRDNARTGRVT------AIDFRDIMVTIR-----PHVLTPFVEECLVAAAGGTTSHQVS--FSYFNGFNSLLNNMELIRKIYSTLAGTRKDVEVTKEEFVLAAQKFGQ--------VTPMEVDILFQLADLYEPRGRMTLADIERIAPP--NPD----HVGGYKLAVATFAGIENKFGLYL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4P5W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -274822 for 2172 contacts (-126.5/contact) +
2D Compatibility (PS) -29859 + (NN) -7436 + (LL) 3204
1D Compatibility (HY) -4800 + (ID) 2400
Total energy: -316113.0 ( -145.54 by residue)
QMean score : 0.209
|
|
|