Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MSFLNGTSLTPASFILNGIP---GLEDVHLWISFPLCTMYSIAITGNFGLM-------YLIYCDEALHRPM----------YVFL---ALLSFTDV----LMCTSTL---PNT-LFILWFNLKEIDFKACLAQMFFVHTFTGMESGVLMLMALD-----HCVAICFPLRYATILTNSVIAKAGFLTFLRGVMLVIPSTFLTKRLPYCKGNVIPHTYCDHMSVAKISCGNVRVNAIYGLIVALLIGGFDILCI---TISYTMILQAV------VSLSSADARQKAFSTCTAHFCAIVLTYVPAFFTFFTHHFGGHTIPLHIHIIMANLYLLMPPTMNPIVY-----GVKTRQVR---ESVIR------FFLKGKDNSHNF---------------------------------------------------------------- |
| 4YHC Chain:A ((2-468)) | GWSDHDELSTDTTLHEEKFRIEPVPVHHQLDILKIAVSENYKTFASVGLDRSLVVWDLRQWCTKLVLSKEQMPRTLKAIALDPQGNYVSLFSKDTLFILNVESPSLMLQHSYHSKPNSKLNVFWMPGTHKDDEWKNFELVVVES-----SGEIQVFSLTIEIEGADIALVEKFQLSSPIIKSISIVSPTANRIASLTESGEVTVYSKKGPVWSPKILSQNKNYLTETKK----DIYGIAMADILFLARDSGVDMIDLKNDELLHSFTLPPIKVNTFSVGVSNSRFVNGQFRVSSISFCFTHAVTEKVLYYYYGNESNESYIILNKWDQQPNLVDVHDPDNSLASLTFDELQENIHEVEDASESVMSSDGLYIFGMRRKSSSGISGETQVWEVWMYSQSEKKHRSKSLKMYNSLIIADPGPSLAVSDRCVAIVLGNYVALVGYGSEIFR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -320810 for 2111 contacts (-152.0/contact) +
2D Compatibility (PS) -33052 + (NN) 8986 + (LL) 384
1D Compatibility (HY) -12000 + (ID) 2700
Total energy: -359192.0 ( -170.15 by residue)
QMean score : 0.078
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