Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------MEGKNLTSISECFLLGFSEQLEEQKPLFGSFLFMYLVTVAGNLLIILVIITDTQLH--TPMYFFLANLSLADACFVSTTVPKM--LANIQIQSQAISYSGCLLQLYFFMLFVMLEAFLLAVM----AYDCYVAICHPLHYILIMS---------PGLCIFLVS----------ASWIMNALHSLLHTLLMNSLSFCANHEIPHF--FCDINPLLSLSCTDPFTNELVIFITGG----------------LTGLICVLCLIISYTNVFSTILKIPSAQGKRKAFSTCSSHLSVVSLF-------FGTSFCVDFSSPSTHS--AQKDTVASVMYTVVTPMLNPFIYSLRNQEIKSSLRKLIWVRKIHSP |
| 4KPP Chain:A ((2-396)) | DFTKEKFQLLAISSLTLPWLISLAFNYHHPALTQTLLSGLAVVSASFLISWAAETAEMDVPRSFSLAIVALLAVLPEYAVDGYFAWKAGSVGGEYVHYATANMTGANRLLIGIGWSLVAFIAFRTLKSKEVELDDGIRLEIFFLFLATLYAFTLPLKGHISPFDALVFVSLYAIYIYLSTKAEREEVEVGGVPAYLCSLKTETRRLSVVVLFLFAGFTILMSVEAFSEGLLETARIAGIDEFLAVQWIAPLASESPELIVAIYFVRRFRVSASMNALISSKVNQWTLLIGTIAIIYSISAFKLQSLPLDARQSEEVLLTAAQSLFAVAILLDLKISWKEASALFLLFIVQLLFPGVEVRYIISAIYIILSLPILFA-----KRKEIVESFRTVKRLISLE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KPP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -260183 for 2413 contacts (-107.8/contact) +
2D Compatibility (PS) -31610 + (NN) -10474 + (LL) 408
1D Compatibility (HY) -19600 + (ID) 2450
Total energy: -323909.0 ( -134.23 by residue)
QMean score : 0.080
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