Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNWVNDSIIQEFILLGFSDRPWLEFPLLVVFLISYTVTIFGNLTIILVSRLDTKLHTPMYFFLTNLSLLDLCYTTCTVPQMLVNLCSIRKVISYRGCVAQLFIFLALGATEYLLLAVMSFDRFVAICRPLHYSVIMHQRLCLQLAAASWVTGFSNSVWLSTLTLQLPLCDPYVIDHFLCEVPALLKLSCVETTANEAELFLVSELFHLIPLTLILISYAFIVRAVLRIQSAEGRQKAFGTCGSHLIVVSLFYSTAVSVYLQPPSPSSKDQGKMVSLFYGIIAPMLNPLIYTLRNKEVKEGFKRLVARVFLIKK |
| 2ZIH Chain:A ((62-343)) | INIPTLTLMEEVLLMGLRDRE--GYLSFWNDSISYALRGCIIIELALRGKIRILDDSARKRFDLSERLIEVIDSSKTGEVLLDET--LQLMKNDEPLSISNWIDLLSGETWNLLKINYQLKQ-------------VRERLAKGLVDKGVLRT-EMKNFFLFDMATHPIADASCKEAIKRRVLSVLVSRNMELSYNEYFPETTSFKIIRTLALICGSYGANVLENVLTTLEYEKRDKAISRAEEIMAQFS-------QYPFDLEKETELGVSV------NLNKEVKEEIENNPGHDLQLEVIAGVFEVFSRMDM |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZIH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -254792 for 2285 contacts (-111.5/contact) +
2D Compatibility (PS) -28923 + (NN) 44 + (LL) 3392
1D Compatibility (HY) -2000 + (ID) 2000
Total energy: -284279.0 ( -124.41 by residue)
QMean score : 0.269
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