Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------MGRWV-----------NQSYTDGFFLLGIFSHSQTDLVLFSAVMVVFTVA-LCGNVL---LIFLIYLDAGLHTPMYFFLSQLSLMDLMLVCNIVPKMAANFLSGRKSISFVGCGIQIGFFVSLVGSEGLLLGLMAYDRYVAVSHPL-----HYPI-----LMNQRVCLQITGSSWAFGIID-------------GVIQMVAAMGLPYCGSRSVDH-----------FFCE-------VQALLKLACADTSLFDTLLFACCVFMLL---------------LPFSIIMASYACILGAVLRIRSAQAWKKALATCSSHLTA----VTLFYGAAMFMYLRPRRYRAPSHDKVASIFYT--VLTPMLN---------PLIYSLRNGE-VMGALRKGLDRCRIGSQH- |
| 4UOX Chain:A ((7-459)) | SASALACSAHALNLIEKRTLDHEEMKALNREVIEYFKEHVNPGFLEYRKSVTAGGDYGAVEWQAGSLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCN-SGTESVEAALKLAKAYQSPRGKFTFIATS---GAFH---GKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALNECKKTGDDVAAVILEPIQGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGMLMAIEFVD-NEIGYNFASEMFRQRVLVAGTLNNAKTIRIEPPLTLTIEQCELVIKAARKALAAMRVSVEEA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UOX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -279693 for 2349 contacts (-119.1/contact) +
2D Compatibility (PS) -31797 + (NN) -2181 + (LL) 1168
1D Compatibility (HY) -4000 + (ID) 3350
Total energy: -319853.0 ( -136.17 by residue)
QMean score : 0.179
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