Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLQKLMEPEAGTNRTAVAEFILLGLVQTEEMQPVVFVLLLFAYLVTTGGNLSILAAVLVEPKLHAPMYFFLGNLSVLDVGCITVTVPAMLGRLLSHKS-TISYDACLSQLFFFHLLAGMDCFLLTAMAYDRLLAICQPLTYSTRMSQTVQRMLVAASLACAFTNALTHTVAMSTLNFCGPNEVNHFYCDLPQLFQLSCSSTQLNELLLFAVGFIMA--GTPLVLIITAYSHVAAAVLRIRSVEGRKKAFSTCG------------------SHLTVVCLFFGRGIFNYMRLGSEEASDKDKGVGVFNTVINPMLNPL----IYSLR-NPDVQGALWQIFLGRRSLT----------------------------- |
| 4XNV Chain:A ((38-382)) | ------------SFKCA--------LTKTGFQFYYLPAVYILVFIIGFLGNSVAIWMFVFHMKPWSGISVYMFNLALADFLYV-LTLPALIFYYFNKTDWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYP--------KSLGRLKKKNAICISVLVWLIVVVAISPILFYSGTGVRK---NKTITCYDTTSDEYLRSYFIYSMCTTVAMFCVPLVLILGCYGLIVRALIY----KMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIVCPLCGVGKDQFEEVEEPLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLDFQTPAMCAFNDRVYATYQVTRGLASLNSCVNPILYFLAGDTFRRR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XNV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155148 for 1854 contacts (-83.7/contact) +
2D Compatibility (PS) -29431 + (NN) -10020 + (LL) 3344
1D Compatibility (HY) -23200 + (ID) 2800
Total energy: -217255.0 ( -117.18 by residue)
QMean score : 0.186
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