Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MDSLNQT--RVTEFVFLGLTD------NRVLEMLFFMAFSAIYMLTLSGNILIIIATVFTPSLHTPMYFFLSNLSFIDICHSSVTVPKMLEGLL-LERKTISFDNCITQLFFLH-----------------LFACAEIFLLIIVAYDRYVAICTPLHYPNVMNMRVCIQLVFALWLGG----TVHSLGQTF-LTIRLPYCGPNIIDSYFCDVPLVIKLACTDTYLTGILIVTNSGTISLSCFLAVVTSYMVILVSLRKHSAEGRQK-ALSTCS---------------------AHFMVVALFFGP--CIFIYTRPDTSFSIDKVVSVFYTVV---TPLLNPFI--YTLRNEE------------VKSAMKQLRQRQVFFTKSYT------- |
| 4R33 Chain:A ((35-418)) | GDFVLPELEDVRAEAATVDTRAVLALAEGEEPAESRAAVALALWEDRSIGTAELQAAAEARCGAR-RPRLHTFVPLYTTNY-----CDSECKMCSMRKGNHRLDRKFSGRKEITEQLEILYHHEGVRGVGFLTGEYEDKHTRLASAFRIGWAIRTALDLGFERVYFNIGSMEQDEIDVLGEWIGREDPVTMCVFQESYDRETYRRFMGKTSVGVPKAD--FDRRVVSFDRWLDA-----GYRYVNPGVLVGLHDDLSAELVSLVAHGDHLRSRGATADLSVPRMRPAMKSRDTTRVGDDDYLRLMSVVAFTCPEQRLVLTTREPQEF--QDVALGLAGVISPGSPDVAPYRAGCEARNDEKSSQFLVADLRRPRHILGRIEASGTPVDHFVNPAGEASR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R33.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -310395 for 2214 contacts (-140.2/contact) +
2D Compatibility (PS) -31822 + (NN) -15023 + (LL) 1624
1D Compatibility (HY) -3200 + (ID) 2850
Total energy: -361666.0 ( -163.35 by residue)
QMean score : 0.227
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