Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MSNEDMEQDNTTLLTEFVLTGLTYQPEWKMPLFLVFLVIYLITIVWNLGLIALIWNDPQLH----------IPMYFFLGSLAFVDAWISSTVTPKMLVNFLAKNR-MISLSECMIQFFSFAFGGTTEC------------FLLATMA------------YDRYVAICKPLLYPVIMNNS-------------LC---------IRLLAFSFLGGFLHALIHEVLIFRLTFCNSNIIHHFYCDIIPLFMISCTDPSINFLMVFILSGSIQVFT---IVTVLNSYTFALFTILKKKSV------------RGVRKAFSTCGAHLLSVSL------YYGPLIFMYLRPASPQADDQDMIDSVFYTIIIPLLNPIIYSLRNKQVIDSFTKMVKRNV-- |
| 4KPP Chain:A ((2-396)) | DFTKEKFQLLAISSLTLPWLISLAFNYHHPALTQTLLSGLAVVSASFLISWAAETAEMDVPRSFSLAIVALLAVLPEYAVDGYFAWKAGSVGGEYVHYATANMTGANRLLIGIGWSLVAFIAFRTLKSKEVELDDGIRLEIFFLFLATLYAFTLPLKGHISPFDALVFVSLYAIYIYLSTKAEREEVEVGGVPAYLCSLKTETRRLSVVVLFLFAGFTILMSVEAFSEGLLETARIAGIDEFLA-VQWIAPLASESPELIVAIYFVRRFRVSASMNALISSKVNQWTLLIGTIAIIYSISAFKLQSLPLDARQSEEVLLTAAQSLFAVAILLDLKISWKEASALFLLFIVQLLFPGVEVRYIISAIYIILSLPILFA-KRKEIVESFRTVKRLISLE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KPP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -288193 for 2419 contacts (-119.1/contact) +
2D Compatibility (PS) -31967 + (NN) -11240 + (LL) 100
1D Compatibility (HY) -13600 + (ID) 2550
Total energy: -347450.0 ( -143.63 by residue)
QMean score : 0.177
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