Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------MQPYTKNW-TQVT----------------EFVMMGFAGIHEAHLLFFILFLT-----------MYLF------TLVENLAIIL---VVGLDHRLRRPMYFFLTHLSCLEIW-YTSVT-VP-KMLAGFIGVDGGKNISYADCLSQLFI--FTFLGATECFLL-AAMAYDRYVAIC---MPLHYGAFVSWGTCIRLAAACW---------LVGFLT---PILPIYLLSQLTFYGPNVIDHFSCDASPLL-------ALSC--------------SDV---TWKETVDFLVSLAVLLASSMVIAVSYGNIVWTLLHIRSAAE------RWKAF--------STCAAHLTVVSLFYGTLFF-------------MYV-Q-------TKVTSSINF-NKVVSVFYSVVTPMLNPLIYS----LRNKEVKGALGRVFSLNFWKGQ-------------- |
| 4OWT Chain:A ((1-466)) | GGRLLLSTSLDAKDELEERLERCMSIVTSMTAGVSEREANDALNAYVCKGLPQHEEICLGLFTLILTEPAQAQKCYRDLALVSRDGMNIVLNKINQILMEKYLKLQDTCRTQLVWLVRELVKSGVLGADGVCMTFMKQIAG--GDVTAKNIWLAESVLDILTEQREWVLKSSILIAMAVYTYLRLIVDHHGTAQLQALRQKEVDFCISLLRERFMECLMIGRDLVRLLQNVARIPEFELLWKDIIHNPQALSPQFTGILQLLQSRTSRKFLACRLTPDMETKLLFMTSRVRFGQQKRYQDWFQRQYLSTPDSQSLRCDLIRYICGVVHPSNEVLSSDILPRWAIIGWLLTTCTSNVAASNAKLALFYDWLFFSPDKDSIMNIEPAILVMHHSMKPHPAITATLLDFMCRIIPNFYPPLEGHVRQGVFSSLNHIVEKRVLAHLAPLFDNPKLDKELRAMLREKFPEFCS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OWT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185780 for 1964 contacts (-94.6/contact) +
2D Compatibility (PS) -30283 + (NN) 6994 + (LL) 336
1D Compatibility (HY) 11600 + (ID) 1000
Total energy: -198133.0 ( -100.88 by residue)
QMean score : 0.001
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