Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------MIIYKQGITFLQKENNNTIHLNTMFFLSPAETHQRMAAENHSFVTKFILVGLTEKSELQL------------------------PLFLV-----------FLGIYVVTVLGNLGMITLIGL----SSHLHTPMYCFLSSLSF--IDFCHSTVITPKMLVNFVTEKNIISYPEC-----------------MTQLYFFLVFAIAECHMLAAMAYDGYVAICS-------------------PLLYSIIISNKACFSLI--------LVVYVIGLICASAHIGCMFRVQFCKFDVINHYF---CDLISILK--------LSCSSTYINELLILIF-------------SGINILVPSLTILSSYIFIIASILRIRYTEGRSKAFSTCSSHISAVSVFFGSAAFMYLQP------SSVSSMDQGKVSSVFYTI-----VVPMLNPLIYSLRNKDVHVALKKTLG----KRTFL--------- |
| 4Q0C Chain:A ((66-578)) | SQELTLVGKAAVPDVEVALDGDDWRWLARKRVLTLGVYAPDIPPFDVTYGERYEGLTADYMAIIAHNLGMQAKVLRYPTREQALSALESGQIDLIGTVNGTDGRQQSLRLSVPYAADHPVIVMPIGARHVPASNLAGQRLAVDINYLPKETLARAYPQATLHYFPSSEQALAAVAYGQADVFIGDALTTSHLVSQSYFNDVRVVAPAHIATGGESFGVRADNTRLLRVVNAVLEAIPPSEHRSLIYRWGLGSSISLDFAHPAYSAREQQWMADHPVVKVAVLNLFAPFTLFRTDEQFGGISAAVLQLLQLRTGLDFEIIGVDTVEELIAKLRSGEADMAGALFVNSARESFLSFSRPYVRNGMVIVTRQDPDAPVDADHLDGRTVALVRNSAAIPLLQRRYPQAKVVTADNPSEAMLMVANGQADAVVQTQISASYYVNRYFAGKLRIASALDLPPAEIALATTRGQTELMSILNKALYSISNDELASIISRWRGSDGDPRTWYAYRNEIYLE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q0C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -373326 for 2648 contacts (-141.0/contact) +
2D Compatibility (PS) -36595 + (NN) -7820 + (LL) 0
1D Compatibility (HY) -5200 + (ID) 2650
Total energy: -425591.0 ( -160.72 by residue)
QMean score : 0.157
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