Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MGRRNNTNVPDF--ILTG--------LSDSEEVQM---------ALFILFL----------LIYLITMLGNVGMILIIRLDLQLHT-PMYFFLTH-------------LSFIDLSYSTVI--TPKTL---ANLLTSNYISFMGCFAQMFFFVFLGAAE-----CFLL--SSMAYDRYVAICSPLRYPVIMSKRLCCALVTGPYVISF-INSFVNVVWMSR--LHFCDSNVVRHFFCDTSPILALSCMDTYDIEIMIHILAGSTLMVSLITISA------------SYVSILS-----TILKINSTSGKQKALSTCA--------SHLLG-V-----TIFYGTM----IFTYLKPRKSYSLGRDQVASVF-YTIVIPML-----NPLIYSLRNKEVKNALIRVMQRRQDSR----------------- |
| 4R5O Chain:A ((2-427)) | DDCEDLHLGNLAHYPNVLKGTFPTESQVLELGETLEITPELLNPEGATYSWLVNGKEYSTEPTFSYKIDNPCRADLSCIIKNKYGKVEMSTSFSSNHNFSKGFFYVADGTFNFYDTEKKTAYQDCYASLNAGKTLGIGNYDSANIIHSNGKFYLLVGTSTSNRDHFYIVDAKTLYYENSAVVGANLSGLTILNEQ--YGLVTGDGIRRIDLKSLNNVRIKNERLLCFYNSIIYNGKVLSNDTYKDESKVKYYDVNELIAAKEGEAPAVTELDIIQKQKINFVLAKDGNVYTLESADNGCNIVKIKNDFTLEKVFANFQPAKGPYHSSPTIGMVASETENIIYLVSTDGAIYKYI-LGDSDSLKAPFIAAESGVSITAPLQLNQQSGELYVTYTEERKDESKIVVYSKDGKVLHTVDCGESVPSQILFNN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R5O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -325458 for 2028 contacts (-160.5/contact) +
2D Compatibility (PS) -33448 + (NN) 208 + (LL) 296
1D Compatibility (HY) -17200 + (ID) 3150
Total energy: -378752.0 ( -186.76 by residue)
QMean score : 0.081
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