Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------------------------------------------------------------MEQHNLTTVNEFILTGITDIAELQAPLFALFLMIYVISVMGNLGMIVLTKLDSRLQT-PMYFFLRHLAFMDLGYSTTVGPKMLVNFVVDKNIISYYFCATQLAFFLVFIGSELFILSAMSYDLYVAICNPLLYT----VIMSRRVCQVLVAIPYLYCTFISLLVTIKIFTLSFCGYNVISHFYCDSLPLLPLLCSNTHEIELIILIFAAIDLISSLLIVLLSYLLILVAILRMNSAGRQKAFSTCGAHLTVVIVFYGTLLFMYVQPKSSHSFDTDKVASIFYTLVIPMLNPLIYSLRNK--DVKYALRRTWNNLCNIFV |
4WID Chain:A ((10-362)) | KDMALQHAVDLLEKMLADEEKLTEFNLGDPLFESANDDPIKTLEEIIQEGDDVVGAHQLVVTQIKLRVQRNRRLADEIIREQLTDIRKVFSDKFEKLEQGIQNSYL------LLDKLKTPFQDMRCLFEVANEQFND----TPVPPQYKEFMVCLKQIVQYAVNSSSLEKFVMLITKKDDIKDRVTYTCMKYLLMAMQGTGGPKAINNEEHAKLFFQLS---------------------NYDDLTDANHDGLELIKKLDKEQKEVAFHVNNFTHLVTTLGMALYKEGHQKNDEAMLGM-----HTPITMLSDQVRVLILYLIDEIVHAIHTNSNQS--NDELIDGLKPKVRIVINEFHATLMMGIDKMKFYSLNELREIVNDKI |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4WID.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -246263 for 1837 contacts (-134.1/contact) +
2D Compatibility (PS) -28463 + (NN) -7864 + (LL) 2616
1D Compatibility (HY) -11200 + (ID) 2500
Total energy: -293674.0 ( -159.87 by residue)
QMean score : 0.311
|
|
|